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Kartzinel Lab​ News

Lizard Team, led by Colin, publish natural history note

10/30/2022

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Research highlight: lizard team publishes natural history note (Colin Donihue et al.)

There is a fascinating population of Italian Wall Lizards living in Boston's Fenway Gardens. Even during the height of the pandemic, members of the Lizard Team were able to do some fieldwork observing and tracking the lizard population at this novel site for the species. In the first of several publications the team is leading from this time, we recently published a Natural History Note in Herpetological Review describing a couple of instances of avian predation observed: a hawk and a grackle separately preyed on individuals from this population. The population has only been around for a short number of years, and there are no native lizards in this region, so this represented novel predatory behaviors on a no-analog lizard population in the region. Scroll to page 500 of this Issue of Herpetological Review for some interesting observation and incredible photos published! 
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Beth publishes News & Views reply in Molecular Ecology

10/20/2022

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Research highlight: News & Views published in Molecular Ecology (Bethan Littleford-Colquhoun et al.)

Led by Bethan Littleford-Colquhoun, the Kartzinel Lab published a strong, thoughtful, and evidence-based reply to an earlier comment in Molecular Ecology: Evidence-based strategies to navigate the complexity of dietary DNA.

The take-home: there are a lot of challenges and opportunities when it comes to using dietary DNA metabarcoding strategies to advance a variety of important research agendas; Beth is leading the way when it comes to clear-thinking about how we conduct our studies and how we can strengthen the evidence we use to support our conclusions.
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Visit from Haldre Rogers

9/30/2022

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Dr. Haldre Rogers joins a class at Brown University

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Haldre Rogers joined my class in the lab on PCR Day to join in our efforts to study bird diets from Pacific islands. From left: Hannah, Haldre, Chloe, Owen
We were honored to have Haldre Rogers join the lab during her visit this week. We are huge fans of Haldre -- not only did she give a phenomenal EEOB departmental seminar, but she hung out for a few days to work with us and connect with students. Each year that I teach my 'Conservation genomics' course, we partner with external collaborators to address a real-world conservation problem through our semester-long research projects. This year, one group has entered a collaboration with Haldre and her network of collaborators to better understand the ecology of bird loss in the Northern Mariana Islands. By the end of the year, we plan to report back on the diets of remnant bird populations using dietary DNA metabarcoding methods. We just finished PCR week, and Haldre joined us to do some pipetting!
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Welcome Hannah Hoff!

9/23/2022

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Profile: Hannah Hoff and her work on Yellowstone plant-herbivore interactions

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Hannah scouting field sites at Yellowstone, summer 2022
Since 2022, Hannah Hoff has been a core member of the Kartzinel Lab at Brown University. We were lucky to get to work with Hannah beginning in the summer before she entered our graduate program to focus on ecology and conservation in our partnership with Yellowstone National Park.

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Lab in action at Yellowstone

8/3/2022

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Lab in action at Yellowstone National Park

PictureBeth, Maddy, and Hannah at the north entrance to Yellowstone in Gardiner -- weeks after the 2022 floods (and moments after meeting a Prairie Rattlesnake at the Arch)!

It feels good to have more of the lab getting back into the swing of fieldwork after the worst years of the early pandemic! The lab has always maintained some field activity throughout the pandemic. Ezequiel Vanderhoeven had been working remote from field sites across Argentina; Robert Ang'ila and Peter Lokeny had been keeping active at Mpala in Kenya; Colin Donihue had led  the lizard team in field and lab studies across New England; Amanda Lyons led the terrapin conservation genomics team around the northeastern United States. But a lot of us had to cut back or go it alone more than we would have liked. The tide finally began to turn in 2022, though!

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Avoid this one common pitfall in analyses of dietary DNA data

1/20/2022

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Research highlight: review about dietary DNA published in Molecular Ecology (Bethan Littleford-Coluqhoun et al.)

The Kartzinel Lab led an Open Access review in Molecular Ecology to help you avoid one of the most common mistakes we see in dietary DNA metabarcoding studies. Learn about why "abundance thresholds" may not always be appropriate to use in bioinformatic pipelines, and how to be careful about interpreting them when they are used. Our paper -- The precautionary principle and dietary DNA metabarcoding: commonly used abundance thresholds change ecological interpretation -- was highlighted by the Editorial Board of Molecular Ecology for its contribution to key discussions on this important topic.

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Congratulations Eze on a Rufford Award

10/5/2021

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Ezequiel Vanderhoeven receives Rufford Foundation award

Congratulations to Dr. Ezequiel Vanderhoeven for your Rufford Foundation Grant! Ezequiel plans to study infectious diseases circulating in populations of armadillo species native to the Argentinian Chaco. The goal of the study is to understand how diseases impact populations of these species for the benefit of conservation and to support local governments and communities in the adoption of environmental practices that minimize the risk of spillover. It is an extremely important and ambitious project. The Rufford award not only provides crucial financial support, but also represents a valuable endorsement of the work from a leading international authority on applied conservation biology. 
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Bianca Brown Featured in Brown Alumni Magazine

6/30/2021

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Feature: Bianca Brown in Brown Alumni Magazine

Bianca Brown was featured as one of seven "exceptional alumni" profiled by the Brown Alumni Magazine in 2021. As quoted below, the article "Emerging Victorious" features seven of the many exemplary students who thrived and graduated despite the pandemic. It's a very fitting and well deserved highlight for Bianca, who we are incredibly proud to have had as the first PhD to fledge from the lab. Congratulations, Bianca, we can't wait to see all the good you do in your life and career!
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Photo from Brown Alumni Magazine Feature
It’s been a year. For 13 months, Brown students were isolated, masked, and tested both literally and figuratively. Each one of them performedexceptionally, making it through COVID with determination and resilience, but we can’t fit 2,505 stories into this 10-page feature. So we’re focusing on just seven of the countless exemplary students who earned bachelor’s and advanced degrees this year. Despite having a final year at brown so challenging that it’s literally one for the history books, they’ve created, achieved, and helped others.
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New Research in Journal of Animal Ecology

6/9/2020

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Research highlight: new paper in Journal of Animal Ecology (Tyler Kartzinel et al.)

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Multiple dimensions of dietary diversity in large mammalian herbivores was featured on the cover of the June 2020 issue of Journal of Animal Ecology.
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Welcoming Chrishen Gomez

3/5/2020

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Profile: Chrishen Gomez joins the lab

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Chrishen Gomez is the recipient of a prestigious 2019 Merdeka Award Grant from Malaysia, which was established “to reward citizens and organizations who have made outstanding contributions in their respective fields to the people of Malaysia.” 

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Recent papers highlighted for impact

12/6/2019

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Papers on diet-microbiome linkages in humans and wildlife published in tandem 

Research from the Kartzinel Lab featured on the cover of PNAS: A reticulated giraffe at Mpala Research Centre in Kenya
A pair of recent papers were highlighted for the creative ways the Kartzinel uses DNA metabarcoding to solve problems and ask new questions in fields that span ecology and biomedical science. This post highlights connections between our developing knowledge of diet-microbiome linkages in both humans and wildlife.

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Paper featured on the cover of Nature & in media

6/5/2019

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Research highlight: paper featured on the cover of Nature (Robert Pringle et al.)

Research by Robert Pringle and Tyler Kartzinel featured on the cover of Nature
New research combining large field experiments and molecular ecology published today in Nature. The paper is featured in a Nature News & Views article by Oswald Schmitz, a 3-min Nature Video, a great PBS NOVA article by Katherine Wu, among others.
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Two seniors from the lab are awarded Fulbright Scholarships

4/18/2019

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Two seniors awarded Fulbright scholarships

We could not be more proud of Ashley Bang (DEEPs, left) and Molly Magid (EEB, right), two seniors completing Honors theses in the lab: both recipients of the 2019 Fulbright Scholarship! Ashley is destined for Singapore and Molly for New Zealand. We have been lucky to work with rising stars, and we look forward to seeing them amplify their research and conservation impacts around the world!
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Ashley Bang
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Moly Magid
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2019 Diamondback Terrapin Conservation Genetics Field Season

4/16/2019

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2019 Diamondback terrapin conservation genetics field season

Amanda Lyons and Bianca Brown braved the rainy weather to kick off our terrapin field season. Diamondback terrapins are the only "critically imperiled" reptile in Rhode Island, and a major conservation priority for the state. Amanda and Bianca were joined by our collaborators from the Rhode Island Department of Environmental Management and The Roger Williams Park Zoo. Our research goal is to understand how genetically interconnected are the remaining few terrapin populations in the state, and relatedness to populations from neighboring states. This research is supported in part by a 2019 Voss Undergraduate Research Fellowship in Environmental Science and Communication to Amanda Lyons. Congratulations Amanda, and thanks IBES for supporting this research. 
Amanda Lyons
Amanda Lyons
Bianca Brown
Bianca Brown
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Kartzinel named Ecological Society of America Early Career Fellow

3/2/2018

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Tyler Kartzinel named ESA Early Career Fellow

Tyler was elected to the Ecological Society of America's 2018-2022 cohort of Early Career Fellows. The Society Announced the honor to recognize members who have advanced ecological knowledge and applications and show promise to make outstanding contributions to a wide range of fields served by ESA.
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Tyler Kartzinel: Elected for outstanding contributions at the interface of ecology and molecular biology, and for his pioneering use of DNA metabarcoding to elucidate the structure of complex terrestrial food webs.
It is a tremendous honor to join such an inspiring group of scholars. Thanks to ESA for the leadership and inspiration that it provides to the diversity and generations of ecologists.
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Winter fieldwork in Kenya

2/28/2018

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Winter fieldwork in Kenya

Several members of the lab are just back from an extremely productive field trip. Highlights include a DNA barcoding workshop at the National Museums of Kenya (led by Tyler Kartzinel and of Brown University Brian Gill, and Director Paul Musili from the East African Herbarium), many pre-dawn captures of small mammals (led by Bianca Brown and collaborators from the Goheen lab), and many trees and and megaherbivores counted (led by Brian Gill and Peter Lokeny). Now the team is breaking in the new lab -- copious amounts of data to report soon! Photos of the highlights are below. 

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Savanna wildlife ecology becomes a “textbook example” at HHMI

2/4/2018

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Feature: Tyler Kartzinel's research as an HHMI textbook example

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Howard Hughes Medical Institute (HHMI) just released a “BioInteractive” lab featuring our research on the diets of savanna herbivores.


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Budischak's "rewilding lab mice" paper in Frontiers in Immunology

1/8/2018

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​Research highlight: experimental work to rewild sick lab mice published (Sarah Budischak et al.)

The full text of an exciting paper featuring dietary DNA metabarcoding work in collaboration with the Kartzinel Lab was published: Feeding immunity: physiological and behavioral responses to infection and resource limitation. The article appears in a special feature of Frontiers in Immunology entitled Wild immunity -- the answers are out there.

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Bianca Brown wins GRFP!

3/17/2017

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​Bianca Brown wins NSF Graduate Research Fellowship (GRFP)

Congratulations to Bianca Brown for her big win - a National Science Foundation Graduate Research Fellowship (GRFP) to support her ecology and evolution PhD research! 
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In the Field with Biodiversity Initiative

1/13/2017

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In the field with Biodiversity Initiative

Thanks to the inspiring organization — Biodiversity Initiative — for inviting our lab to join research and conservation efforts in the understudied tropical forests of Equatorial Guinea.
Highlights from a brief visit include:
  1. A workshop with government officials (and other stakeholders) to discuss opportunities to better conserve wildlife and protected areas.
  2. Hiking with a bushmeat hunter to learn about the first links in the wildlife trafficking chain—the way legal trapping of wildlife by local subsistence hunters can feed into international crime through the trade of endangered species, like pangolin. (Importantly, hunting was forbidden during my visit.)​
  3. The magnificence of a primary Congo Rainforest on Equatorial Guinea's mainland.

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Dr. Tyler Kartzinel
Department of Ecology, Evolution, and Organismal Biology
Institute at Brown for Environment and Society
Brown University

​Physical Locations:
  • 85 Waterman Street, Providence, Rhode Island 02912 USA
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Brown University
Providence, RI, 02912-1951
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​Phone: 1-401-863-5851
tyler_kartzinel[at]brown.edu
Disclaimer: views expressed on this site are those of the author. They should not be interpreted as opinions or policies held by his employer, collaborators, or lab members. Mention of trade names or commercial products does not constitute endorsement.

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