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Kartzinel Lab​ News

Learning from the past in Yukon

1/12/2026

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Reconstructing 10,000 Years of Caribou Diets from Melting Yukon Ice Patches

Dr. Carson Hedberg and team on an expedition to the Gladstone Ice Patch
Dr. Carson Hedberg and team on an expedition to the Gladstone Ice Patch
A prestigious NSF Postdoctoral Fellowship from the Office of Polar Programs that was awarded to Carson Hedberg is powering a new Kartzinel Lab project in the Yukon: using ancient DNA preserved in towering alpine ice patches to reconstruct thousands of years of change in caribou diets since the end of the last Ice Age. By sequencing genetic traces of food that have been locked inside caribou dung and literally frozen in time, Carson is asking how these animals have weathered past climate shifts—and what this can tell us about prospects for their future.

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Metabarcoding vs Microhistology

1/5/2026

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Metabarcoding vs Microhistology: Comparing Dietary Analysis Methods

Tyler Kartzinel

Originally posted 1/6/2026.

At First Bite: Why Do Animal Diets Matter?

Understanding what animals eat is central to ecology, evolution, and conservation. Diets shape species interaction networks, how energy flows through food webs, and what animals can do when environments change. For decades, ecologists have inspected animal scats using microscopes to identify what they have been eating. Today, DNA-based approaches offer a powerful alternative.

So how do these two methods stack up—and when should you use each?
Savanna elephant eating from the understory at Mpala Research Centre in Kenya
Savanna elephant eating from the understory at Mpala Research Centre in Kenya. Photo credit: Tyler Kartzinel

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Do Undergraduate Research in the Kartzinel Lab at Brown

1/3/2026

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Do undergraduate research in the Kartzinel Lab at Brown

Undergraduates join our lab's research group for many reasons. As members of the research group, students can conduct research in our DNA lab, on the computer, and at field sites throughout Rhode Island and around the world. In addition to 'pure' research in the traditional sense, we also work with students to practice science communication through a variety of media -- we are especially excited to work with students who share our passion for raising awareness about the environment and achieving real-world conservation impacts. Read on and you'll find a trove of information about why and how you should consider joining us!

2025 Voss Fellow Sofia Kassalow shares her exciting research in the lab!

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Earn a Master's Degree in the Kartzinel Lab at Brown

1/2/2026

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Earn a Master’s degree in the Kartzinel Lab at Brown

Applying for a master's degree can be an extremely rewarding step to take in your career! Brown University is seeking to expand its offerings for graduate degrees at this level, and one of them may be a great match to your personal and professional interests. Because you will discover an array of existing and potentially new opportunities to engage with my lab as a master's student, I want to help you navigate the opportunities and answer common questions you may have. If that sounds good to you, read on...!

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Earn a PhD in the Kartzinel Lab at Brown

1/1/2026

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Earn a PhD in the Kartzinel Lab at Brown

What you need to know is that PhDs from the Kartzinel Lab lead outstanding basic research that can have transdisciplinary extensions with significant conservation impacts in the real world.

All PhD students will be enrolled in the Department of 
Ecology, Evolution, and Organismal Biology (EEOB), and those who pursue research with a significant conservation component will benefit from unique opportunities within the Institute at Brown for Environment & Society (IBES).

If this sounds like an exciting opportunity for you, I'll share everything you need to know about developing a successful application below...!

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HelmCamp 2026

11/5/2025

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Wildlife Molecular Parasitology: From Taxonomy to DNA in Costa Rica @HelmCamp2026

Students of HelmCamp
Students of HelmCamp learn to analyze DNA from wildlife parasites
Field ecologists and conservation biologists increasingly rely on molecular tools to understand the hidden dynamics of wildlife health and biodiversity. Our lab is pioneering the next generation of strategies in Molecular Parasitology.

In 2026, we are pleased to be co-presenting a unique opportunity to gain these skills through the Organization for Tropical Studies (OTS) in Costa Rica. This will be the second installment of our "HelmCamp" field course: Wildlife Molecular Parasitology: Taxonomy to DNA.


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Study Reveals New England is Key to Survival of Diamondback Terrapins

10/3/2025

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Study: New England is key to survival of diamondback terrapins

A new peer-reviewed study led by researchers at Brown University in partnership with the Rhode Island Department of Environmental Management revealed that diamondback terrapins (Malaclemys terrapin), iconic turtles of America’s salt marshes, face heightened risks at the northern edge of their range in New England.
First large-scale genetic study of diamondback terrapins across their northern range highlights urgent conservation needs as federal endangered species listing is considered.

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Story behind the science: Yellowstone Wildlife Diets

9/8/2025

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Story behind the science: Yellowstone wildlife diets

Rethinking how we classify animals based on what they eat—and what it means for wildlife management
An article by science journalist Livi Milloway chronicles an "ah-ha" moment we had in our Yellowstone National Park research project. The story published in The Wildlife Society Bulletin, titled An herbivore by any other name, unpacks how Hannah Hoff's recent paper in PNAS challenges the status quo when it comes to how scientists study and understand wildlife diets. 

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Hoff awarded Blavatnik Family Graduate Fellowship in Biology and Medicine

8/6/2025

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Hannah Hoff awarded Blavatnik Family Graduate Fellowship

Hannah Hoff, PhD candidate, wins Blavatnik Fellowship

Outstanding scholarship & innovation in the life sciences.
Hannah Hoff, PhD candidate in the lab, has accepted a Blavatnik Family Graduate Fellowship in Biology & Medicine at Brown University. This is a highly competitive and well-deserved honor. Hannah has helped lead our work in Yellowstone National Park since 2021.

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Apportionment of dietary diversity in wildlife

7/15/2025

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Research highlight: Apportionment of Dietary Diversity in Wildlife published in PNAS (Hannah Hoff et al.)

Led by Hannah Hoff, in collaboration with the National Park Service and the Brown University Herbarium, the lab just published a blockbuster paper that summarizes, critiques, and enhances how ecologists tend to talk about what wildlife eat. There are some surprising and potentially sensitive elements to the story—both for how we monitor and manage wildlife populations and for how we address our implicit biases when observing and reporting on wildlife as scientists.
Related content:
  • Paper published in PNAS
  • Hannah wins prestigious award
  • Code to replicate analyses
  • Results find attention in the press

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Kartzinel Interview with Mongabay about DNA barcoding

6/27/2025

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Interview: DNA barcoding and conservation (Mongabay)

DNA sequencing to meet global biodiversity goals: Interview with Tyler Kartzinel
Tyler sat down for an interview with Abhishyant Kidangoor of Mongabay to discuss our recent Mini Review in Molecular Ecology, entitled Global Availability of Plant DNA Barcodes as Genomic Resources to Support Basic and Policy-Relevant Biodiversity Research.

You can read our conversation here at Mongabay. It covers topics that are among the most important for ensuring the reliability of DNA-based biodiversity research, including equitable access to the benefits arising from this technology and the reputations of all who use it.

The work was also highlighted in Spanish by El Mostrador: Código de barras de plantas: herramienta genética clave que busca ser fortalecida en el sur global

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What parasites infect tropical wildlife?

6/14/2025

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Research highlight: what parasites infect tropical wildlife?

One of the top “unsolved problems” in biology is the need to untangle complex networks of species interactions - perhaps nowhere is this more consequential than our need to grapple with the socioecological risks of neglected tropical diseases. Human-livestock-wildlife parasite transmission has been declared a major biomedical challenge for the 21st century with reasons for concern that include the potential for zoonotic helminths—parasitic worms such as nematodes (roundworms), cestodes (tapeworms), and trematodes (flukes) to be transmitted between humans and animals. The effects cause malnutrition, developmental delays, and deaths that disproportionately affect communities undergoing rapid development.

A critical problem is that our strategies to identify and track wildlife parasites originated to combat livestock diseases a century ago. We know very little about how to answer the question: What parasites infect tropical wildlife? We know far more about the subset of parasites that harm humans and livestock than all others. Consequently, our conservation partners struggle to identify the parasites they encounter, hindering our collective efforts to rehabilitate endangered species, evaluate emerging health threats, and treat diseases.

Fortunately, we have just received a Catalyst award from the Institute at Brown for Environment and Society to pursue new strategies in the field of Molecular Parasitology 🏆

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New paper on gastrointestinal parasites of sloths in Costa Rica

5/26/2025

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Research highlight: gastrointestinal parasites of Costa Rican sloths (Ezequiel Vanderhoeven et al.)

A new paper from the Kartzinel Lab is the first to compare the parasites of wild two- and three-toed sloths living in both primary forests and urban habitats. Led by Ezequiel Vanderhoeven, the paper Host specificity of gastrointestinal parasites in free-ranging sloths from Costa Rica was published in partnership with our friends at Sloth Conservation Foundation.

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Award-winning photo featured by Brown's Medical School

2/28/2025

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Feature: Montana Stone’s award‑winning photo

Culpeo fox at Fray Jorge National Park, By Montana Stone
Zorro by Montana Stone
The magazine Medicine@Brown featured Montana Stone's award-winning photo of "Zorro" -- a culpeo fox -- taken at our long-term ecological research site in Fray Jorge National Park in Chile. 
Discover the motivation behind our ambitious research project at the Fray Jorge long-term ecology project!

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Videvall et al. published article on giraffe diets and microbiomes

2/28/2025

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Research highlight: giraffe diets and microbiomes (Videvall et al.)

With great fanfare, Elin Videvall led a paper describing the diets and microbiomes of three giraffe species that all live in close proximity to each other around the equator in Kenya. This much-anticipated paper was initiated together with Brian Gill and Peter Lokeny many years ago.
The article was published open access in Global Ecology and Conservation with a press release entitled Unexpected discoveries in study of giraffe gut flora

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Prized postdoc takes Prize Fellowship

1/23/2025

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Profile: Bethan Littleford-Colquhoun postdoc takes Prize Fellowship to launch a new lab

The lab bid farewell to Bethan Littleford-Colquhoun -- who has been the beating heart of our program for several years -- as she embarked on the next exciting chapter in her career. 

Beth has been awarded a prestigious Prize Fellow to launch her independent research group at the University of Bath in the UK, where she will join a cohort of talented PIs forming a new research cluster focused on the microbiome. Because Beth will be there, it is sure to become an exciting epicenter for excellence in the field. Students and junior researchers who are interested -- take note!

We will all miss Beth, but we take heart in knowing that we can continue to collaborate and learn from her for years to come. What an all-star she is...!!
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Courtney publishes paper in Journal of Experimental Biology

1/10/2025

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Research highlight: paper in Journal of Experimental Biology (Courtney Reed et al.)

The upshot: The gerbils that are the best jumpers are not necessarily the best maneuverers, and vice versa. Led by Courtney Reed, the Kartzinel Lab ran a series of controlled laboratory tests to discover that each individual's decision in the pivotal moment it meets a predator may be enabled by -- or constrained by -- the anatomy of its hind limbs. The paper Distinct morphological drivers of jumping and maneuvering performance in gerbils was published in Journal of Experimental Biology!

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Field workshop with Save the Elephants

12/24/2024

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Story behind the science: Field training with Save the Elephants

Mary Burak led a workshop together with Save the Elephants and the National Museums of Kenya. The meeting convened at the Save the Elephants headquarters at Samburu, and the team spent a few days learning to collect voucher plant specimens for DNA barcoding. In a very short period of time, they added an important chunk of regional plant diversity to the collections available for barcoding.
The training and work completed will dramatically increase our ability to precisely characterize the diets of elephants across Kenya. It was super gratifying to see such a great group of scholars, conservationists, long-time collaborators, and all-around quality people coming together to do such important work. Mary shared some great photos of the team in action: Paul Musili, Rispa Kathurima, Gideon Galimogle, and Evans Nawasa.
Check out the kinds of field sampling protocols we teach in these workshops using freely available PDFs in our Field Protocols.

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What fuels wildlife migrations across Yellowstone?

9/19/2024

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Research highlight: what fuels wildlife migrations across Yellowstone?

A new paper from the lab was led by postdoc Bethan Littleford-Colquhoun and published in Royal Society Open Science: "Body size modulates the extent of seasonal diet switching by large mammalian herbivores in Yellowstone National Park."
The paper is free to read and download. You can find it posted together with all our papers on the Publications page.

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Bianca Brown's PhD work on microbiomes published!

5/16/2024

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Research highlight: Study on structural and functional variation in host-microbiome interactions published in Ecosphere (Bianca Brown et al.)

Congratulations to Bianca Brown, microbiome scientist extraordinaire, on her publication appearing today in Ecosphere! Spatiotemporal variation in the gut microbiomes of co-occurring wild rodent species is freely available via open access. It is a rare example of the type of insightful work that can develop through collaborations involving field, lab, and big-data analytical approaches to really understand what's going on with wildlife. It is part of our long-term collaboration with the UHURU project at Mpala Research Centre in Kenya.
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Welcoming Anna Jackson as Lab Manager

12/28/2023

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Profile: Anna Jackson, Lab Manager

Picture
Anna Jackson with a spotted ground squirrel, the subject of her conservation genomics MSc thesis
The lab has been most fortunate to follow the leadership of Anna Jackson, who has been our Lab Manager since early 2024.

​Anna brings years of experience in molecular ecology across multiple institutions together with teaching and leadership experience through her MSc work and service in the Peace Corps. Anna was selected from an internationally competitive application pool and we look forward to enjoying a very productive and rewarding collaboration with her over the long term.

Anna's leadership is integral to the success of all of our work, and she has been particularly active in projects based at Yellowstone National Park, Fray Jorge National Park, and the development of our program in Molecular Parasitology.

You can find a free list of essential Lab Protocols that Anna curates for our site, Contract with Anna for your next project, or Train with her in the lab either on campus at Brown or through one of our international workshops like HelmCamp 2026!
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Exciting new Lab Manager position in my lab

8/30/2023

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Job opening (archived): Lab Manager position

***This position has been filled and closed***
Find more current opportunities on the Join page of the Kartzinel Lab's website.

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Welcome Dr. Mary Burak!

8/21/2023

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Profile: Dr. Mary Burak and her conservation research in African savannas

Dr. Mary Burak
Since 2023, we have been most fortunate to collaborate with Dr. Mary Burak on conservation research in African savannas. Mary joined the lab as a Fulbright Scholar based in Kenya, with continuing support provided by a Voss Postdoctoral Fellowship from the Institute at Brown for Environment and Society. Together these prestigious awards provided three years of support Mary to connect Brown University with its research on African savannas.

Mary collaborates with a number of major NGOs, including Save the Elephants, The National Museums of Kenya, and Mpala Research Centre to address critical data needs for the conservation of large carnivores and herbivores across Kenya. 

Mary is based in Nairobi. She completed a PhD in Os Schmitz's lab at Yale University in 2023.
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Elephant foraging cohesion paper published by Royal Society

7/14/2023

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Research highlight: elephant foraging cohesion study (Brian Gill et al.)

The paper led by Brian Gill on individual-level tracking of elephant diets -- Foraging History of Individual Elephants Using DNA Metabarcoding -- was just published by Royal Society Open Science. We are very proud of this paper, which revisits a set of classic studies on seasonal diet switching by elephants using stable isotopes in hair that were led by coauthors Thure Cerling and George Wittemeyer. The work was made possible with support in the field from Save the Elephants and with the botanical expertise of coauthor Paul Musili from the National Museums of Kenya.

The paper was accompanied by a great summary by Corrie Pikul and featured on the Brown University homepage: Similar to Humans, Elephants Vary What they Eat for Dinner. 

The paper also attracted attention in the media, including interviews on BBC Television and Times Radio. Some nice coverage of the study was also provided by BBC (with hilarious photos), Newsweek, ZME Science, and The Times. 
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CRISPR-linked DNA barcoding with Oxford Nanopore MinION

6/30/2023

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Research highlight: CRISPR-linked DNA barcode sequencing (Bethan Littleford-Coluhoun et al.)

Led by Bethan Littleford-Colquhoun, the Kartzinel Lab published a paper describes our efforts to repurpose CRISPR technology in ways that might help overcome persistent drawbacks to PCR and other targeted enrichment strategies in molecular ecology. This post provides a summary of the strategy we used and the lessons we learned in publishing A CRISPR-based strategy for targeted sequencing in biodiversity science at Molecular Ecology Resources. The article was originally posted as a BioRxiv preprint.

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Dr. Tyler Kartzinel
Department of Ecology, Evolution, and Organismal Biology
Institute at Brown for Environment and Society
Brown University
​Address: 85 Waterman Street, Providence, Rhode Island 02912 USA
Office: 246(B)
​Lab (pre-PCR): 244
​Lab (post-PCR): 230
​Phone: 1-401-863-5851
tyler_kartzinel[at]brown.edu
Disclaimer: views expressed on this site are those of the author. They should not be interpreted as opinions or policies held by his employer, collaborators, or lab members. Mention of trade names or commercial products does not constitute endorsement.

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