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Bioinformatics Workshop

We have curated our most popular Software & Data repositories so you can find them easily

Our Lab's GitHub site also provides useful info and resources related to current projects

High-performance computing on Oscar

1/24/2019

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High-Performance Computing on the OSCAR Supercomputer

Brown University's high performance computing cluster, called Oscar, is a keystone resource for research in the Kartzinel Lab. The resource and information about it are regularly updated; users may find the links provided in this post to be especially helpful as they are getting  started.
  • Overview of Oscar by the Brown University Center for Computation and Visualization
  • Getting started with Oscar by the Brown University Center for Computation and Visualization
  • The Kartzinel Lab's main Software and Data page, many of which are maintained for use on Oscar
  • The Kartzinel Lab's Guidance on Use of AI, which includes information about extra security provided by using AI through Brown's computing resources.
  • In 2019 Prof Rebecca Kartzinel shared a tutorial that provides some intuitive explanations relevant to our lab about how to understand computing on Brown University's high-performance cluster. These notes and code from 2019 are still available.
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Dr. Tyler Kartzinel
Department of Ecology, Evolution, and Organismal Biology
Institute at Brown for Environment and Society
Brown University
​Address: 85 Waterman Street, Providence, Rhode Island 02912 USA
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​Lab (pre-PCR): 244
​Lab (post-PCR): 230
​Phone: 1-401-863-5851
tyler_kartzinel[at]brown.edu
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  • Home
  • Research
    • DNA metabarcoding
    • Conservation Genetics
    • Yellowstone
    • Fray Jorge
    • Savanna Ecology
    • Molecular Parasitology
  • Resources
    • Publications
    • Software & Data
    • Protocols
    • News
    • Bioinformatics Workshop
  • Impact
    • Conservation
    • Annual Reports
    • Donate
  • Work with us
    • People
    • Join
    • Contract & Collaborate >
      • DNA metabarcoding contracts
      • DNA barcoding
      • Training
  • Contact